CDS

Accession Number TCMCG027C05111
gbkey CDS
Protein Id XP_018819253.1
Location complement(join(18651535..18651699,18653088..18653210,18653296..18653410,18653736..18653834,18653911..18653963,18654096..18654252,18655056..18655114,18655246..18655313,18655403..18655546,18656660..18656723,18659571..18659621,18659711..18659850,18659951..18660090,18666827..18666912,18666997..18667142,18667249..18667321,18668973..18669048,18669225..18669332,18669509..18669555,18670180..18670225,18670888..18671000,18671098..18671133,18671294..18671497,18672606..18672671))
Gene LOC108989935
GeneID 108989935
Organism Juglans regia

Protein

Length 792aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_018963708.2
Definition DNA mismatch repair protein MSH4 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGACGACGGAGGAGAGAGATCGAGCTTTGTGGTCGGTCTTATCGAGAACAGAGCTAAAGAAGTTGGAGTTGCTGCTTTCGACTTGAGGTTGGCTTCATTGCATCTTTCTCAATATATTGAAACTAGCAGCTCCTATCAGAATACAAAAACTTTGCTGCATTTCTATGATCCATTGGTTATCATTGTTACTCCAAACAAGCTGGCACCAGATGGTATGGTTGGAGTTTCGGAGTTGGTGGATAGATTTTATGCTACAGTCAAGAAGGTTGTAATGGCCCGTGGTTGCTTTGATGATACCAAGGGTGCTGTGCTGATTAAAAATCTAGCTGCCAAGGAGCCTTCTGCACTTGGTTTGGATAGTTATTACAAGCAGTATTATCTCTGTTTGGCTGCTGCTGCCGCTACTATTAAGTGGATAGAAGCAGAAAAGGGACTTATTATTACAAACCGCTCATTATCGGTTACCTTTAATGGATCATTTGACCACATGAACATTGACGCTACCAGTGTCCAAAATTTGGAAATTATTGAGCCACTTTACTCAAGCCTTTGGGGCACAAGCAACAAAAAGCAAAGTCTATTCCACATGCTAAAGACAACAAAAACAATTGGAGGGACTAGACTTCTTCGTGCCAATATTTTGCAGCCATTAAAAGATATTGAAACTATCAATGCTCGCCTTGATTGTCTGGATGAGCTGATGAGCAATGAACAGCTATTTTTTGGACTCTCTCAGGTTCTGCGTAAATTTCCAAAAGAAACTGATAGAGTACTATGTCACTTCTGCTTTAAGCCTAAGAAAATTACAAATGAGGTCTTGGGTATTGATTATGCTAGAAAGAGCCAAATGTTAATCTCAAGCATTATTCTCCTTAAAACTGCTTTGGATGCGCTACCTTTACTCTCAAAGGTACTTAAGGATGCGAAAAGTTTTCTTCTTGCAAACATTTACAAGTCTGTATGTGAAAATGAGAAATATGCATCAATTAAAAAGAGGATTGGAGAGGTTATTGATGAAGATGTGCTTCATGCACGGGTTCCATTTGTTGCTCGCACACAGCAGTGTTTTGCTGTCAAGGCTGGAATTGATGGACTTTTGGATTTAGCAAGGAGGTCCTTTTGTGATACTAGTGAAGCTATTCATAATCTTGCAAACAAGTATCGTGAAGATTTCAAATTGCCCAATTTGAAACTTCCCTTTAACAATAGGCAAGGGTTCTACTTTAGCATTCCACAGAAGGATGTTCAAGGAAAGCTTCCTAACAAGTTCATTCAGGTCTTGAAACATGGCAACAATATACATTGCTCAACTCTGGAACTTGCTTCTTTGAATGTTAGAAATAAGTCTGCAGCTGCAGAGTGCTATATACGAACAGAAGTTTGCCTGGAAGCACTTTTAGATGCCATACGGGAGGATGTCTCTTTGCTTACTCTACTTGCAGAGGTATTATGCCTGTTAGATATGATTGTCAACTCATTTGCTCATACAATATCCACTAAGCCTGTTGATCGATATACTAGACCAGAATTCACAGACAATGGCCCAATGGCAATTGATGCTGGAAGGCATCCTATCCTGGAAAGCATACACAATGACTTCATCCCCAACAATCTCTTTCTCTCAGAAGCATCAAATATGGTGATTATAATGGGCCCAAACATGAGTGGAAAGAGCACTTATCTTCAACAAGTGTGTCTTATAGTTATTCTTGCTCAGATTGGTTGCTATGTTCCTGCTCACTTCTCAACTTTAAGGGTGGTCGATCGTATATTTACAAGGATGGGTGCAGTGGATAATCTTGAATCGAACTCCAGTACATTCATGACAGAGATGAAAGAGACAGCTTTTGTAACACAGAATGTCTCTGAAAGGAGTCTGATTGTAATGGATGAGCTTGGGAGGGCTACTTCTTCCTCTGATGGATTTGCAATTGCATGGAGCTGCTGCGAGTATCTATTACCACTGAAAGCGTATACTATATTTGCTACTCATATGGAGAATCTATCAGAATTAGCAACCATCTATCCAAATGTGAAAATTCTTCACTTCCAGGTTGACATTAGAAACAACCGTCTAGATTTCCAGCATCAACTCAAGGACGGTCCAAGACGTGTACCACACTATGGCCTATTGTTGGCAGAAGTGGCAGGTTTACCAAGCTCAGTTATTGAAACAGCCAGAAGCATCACATCCCGGATCGCTGAAAAGGAAGTGAAGAGGATGGAAATAAACTACATGCAGTATCATCCAATCCAGATGGCTTACCGTGTTGCTCAGCGGCTGATATGCTTGAAGTACTCCAGCCAAGACGAGGACTCAATTCGACAAGCATTGCAGGATCTCAAAGAGCAGTATGCTGATGGAAGTCTATAG
Protein:  
MEDDGGERSSFVVGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLHFYDPLVIIVTPNKLAPDGMVGVSELVDRFYATVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGLDSYYKQYYLCLAAAAATIKWIEAEKGLIITNRSLSVTFNGSFDHMNIDATSVQNLEIIEPLYSSLWGTSNKKQSLFHMLKTTKTIGGTRLLRANILQPLKDIETINARLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKITNEVLGIDYARKSQMLISSIILLKTALDALPLLSKVLKDAKSFLLANIYKSVCENEKYASIKKRIGEVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDLARRSFCDTSEAIHNLANKYREDFKLPNLKLPFNNRQGFYFSIPQKDVQGKLPNKFIQVLKHGNNIHCSTLELASLNVRNKSAAAECYIRTEVCLEALLDAIREDVSLLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPMAIDAGRHPILESIHNDFIPNNLFLSEASNMVIIMGPNMSGKSTYLQQVCLIVILAQIGCYVPAHFSTLRVVDRIFTRMGAVDNLESNSSTFMTEMKETAFVTQNVSERSLIVMDELGRATSSSDGFAIAWSCCEYLLPLKAYTIFATHMENLSELATIYPNVKILHFQVDIRNNRLDFQHQLKDGPRRVPHYGLLLAEVAGLPSSVIETARSITSRIAEKEVKRMEINYMQYHPIQMAYRVAQRLICLKYSSQDEDSIRQALQDLKEQYADGSL